Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-501-5p in COID Lung Bhattacharjee Cluster 11 Table contains all genes in the COID Lung Bhattacharjee cluster number 11. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-501-5p 55251 PCMTD2 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:15882] T 9223 MAGI1 membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:946] P T 5018 OXA1L oxidase (cytochrome c) assembly 1-like [Source:HGNC Symbol;Acc:8526] zzz999 286148 DPY19L4 dpy-19-like 4 (C. elegans) [Source:HGNC Symbol;Acc:27829] T 8731 RNMT RNA (guanine-7-) methyltransferase [Source:HGNC Symbol;Acc:10075] zzz999 1584 CYP11B1 cytochrome P450, family 11, subfamily B, polypeptide 1 [Source:HGNC Symbol;Acc:2591] zzz999 285282 RABL3 RAB, member of RAS oncogene family-like 3 [Source:HGNC Symbol;Acc:18072] T 2868 GRK4 G protein-coupled receptor kinase 4 [Source:HGNC Symbol;Acc:4543] zzz999 22836 RHOBTB3 Rho-related BTB domain containing 3 [Source:HGNC Symbol;Acc:18757] T 8803 SUCLA2 succinate-CoA ligase, ADP-forming, beta subunit [Source:HGNC Symbol;Acc:11448] P T 10026 PIGK phosphatidylinositol glycan anchor biosynthesis, class K [Source:HGNC Symbol;Acc:8965] T 27241 BBS9 Bardet-Biedl syndrome 9 [Source:HGNC Symbol;Acc:30000] P T 5164 PDK2 pyruvate dehydrogenase kinase, isozyme 2 [Source:HGNC Symbol;Acc:8810] zzz999 402 ARL2 ADP-ribosylation factor-like 2 [Source:HGNC Symbol;Acc:693] zzz999 1022 CDK7 cyclin-dependent kinase 7 [Source:HGNC Symbol;Acc:1778] zzz999 24138 IFIT5 interferon-induced protein with tetratricopeptide repeats 5 [Source:HGNC Symbol;Acc:13328] T 66036 MTMR9 myotubularin related protein 9 [Source:HGNC Symbol;Acc:14596] T 7347 UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:HGNC Symbol;Acc:12515] zzz999 9646 CTR9 Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16850] zzz999 51176 LEF1 lymphoid enhancer-binding factor 1 [Source:HGNC Symbol;Acc:6551] P T 9024 BRSK2 BR serine/threonine kinase 2 [Source:HGNC Symbol;Acc:11405] zzz999 2110 ETFDH electron-transferring-flavoprotein dehydrogenase [Source:HGNC Symbol;Acc:3483] zzz999 27065 zzz999 Neuron-specific protein family member 1 [Source:UniProtKB/Swiss-Prot;Acc:P42857] zzz999 400 ARL1 ADP-ribosylation factor-like 1 [Source:HGNC Symbol;Acc:692] zzz999 23438 HARS2 histidyl-tRNA synthetase 2, mitochondrial (putative) [Source:HGNC Symbol;Acc:4817] zzz999 90362 FAM110B family with sequence similarity 110, member B [Source:HGNC Symbol;Acc:28587] zzz999 23468 CBX5 chromobox homolog 5 [Source:HGNC Symbol;Acc:1555] zzz999 7336 UBE2V2 ubiquitin-conjugating enzyme E2 variant 2 [Source:HGNC Symbol;Acc:12495] zzz999 3050 HBZ hemoglobin, zeta [Source:HGNC Symbol;Acc:4835] zzz999 3375 IAPP islet amyloid polypeptide [Source:HGNC Symbol;Acc:5329] zzz999 51046 ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:HGNC Symbol;Acc:14269] zzz999 135138 PACRG PARK2 co-regulated [Source:HGNC Symbol;Acc:19152] zzz999 2730 GCLM glutamate-cysteine ligase, modifier subunit [Source:HGNC Symbol;Acc:4312] zzz999 8443 GNPAT glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:4416] zzz999 57037 ANKMY2 ankyrin repeat and MYND domain containing 2 [Source:HGNC Symbol;Acc:25370] zzz999 3882 KRT32 keratin 32 [Source:HGNC Symbol;Acc:6449] zzz999 7290 HIRA HIR histone cell cycle regulation defective homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:4916] zzz999 10229 COQ7 coenzyme Q7 homolog, ubiquinone (yeast) [Source:HGNC Symbol;Acc:2244] T 22916 NCBP2 nuclear cap binding protein subunit 2, 20kDa [Source:HGNC Symbol;Acc:7659] T 57821 C1orf114 chromosome 1 open reading frame 114 [Source:HGNC Symbol;Acc:28051] zzz999 5238 PGM3 phosphoglucomutase 3 [Source:HGNC Symbol;Acc:8907] zzz999 373 TRIM23 tripartite motif containing 23 [Source:HGNC Symbol;Acc:660] zzz999 57447 NDRG2 NDRG family member 2 [Source:HGNC Symbol;Acc:14460] zzz999 324 APC adenomatous polyposis coli [Source:HGNC Symbol;Acc:583] zzz999 7090 TLE3 transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila) [Source:HGNC Symbol;Acc:11839] zzz999 5190 PEX6 peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:8859] zzz999 3308 HSPA4 heat shock 70kDa protein 4 [Source:HGNC Symbol;Acc:5237] zzz999 6782 HSPA13 heat shock protein 70kDa family, member 13 [Source:HGNC Symbol;Acc:11375] zzz999 7247 TSN translin [Source:HGNC Symbol;Acc:12379] zzz999 6880 TAF9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa [Source:HGNC Symbol;Acc:11542] zzz999 9666 DZIP3 DAZ interacting protein 3, zinc finger [Source:HGNC Symbol;Acc:30938] zzz999 5463 POU6F1 POU class 6 homeobox 1 [Source:HGNC Symbol;Acc:9224] zzz999 10471 PFDN6 prefoldin subunit 6 [Source:HGNC Symbol;Acc:4926] zzz999 10440 TIMM17A translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:HGNC Symbol;Acc:17315] T 5007 OSBP oxysterol binding protein [Source:HGNC Symbol;Acc:8503] zzz999 10529 NEBL nebulette [Source:HGNC Symbol;Acc:16932] zzz999 38 ACAT1 acetyl-CoA acetyltransferase 1 [Source:HGNC Symbol;Acc:93] zzz999 64963 MRPS11 mitochondrial ribosomal protein S11 [Source:HGNC Symbol;Acc:14050] zzz999 4437 MSH3 mutS homolog 3 (E. coli) [Source:HGNC Symbol;Acc:7326] zzz999 541578 CXorf40B chromosome X open reading frame 40B [Source:HGNC Symbol;Acc:17402] zzz999 10294 DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:HGNC Symbol;Acc:14884] zzz999 1595 CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 [Source:HGNC Symbol;Acc:2649] zzz999 27072 VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:12713] zzz999 4807 NHLH1 nescient helix loop helix 1 [Source:HGNC Symbol;Acc:7817] zzz999 23518 R3HDM1 R3H domain containing 1 [Source:HGNC Symbol;Acc:9757] zzz999 3633 INPP5B inositol polyphosphate-5-phosphatase, 75kDa [Source:HGNC Symbol;Acc:6077] zzz999 5576 PRKAR2A protein kinase, cAMP-dependent, regulatory, type II, alpha [Source:HGNC Symbol;Acc:9391] T 5756 TWF1 twinfilin, actin-binding protein, homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:9620] zzz999 27109 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B) [Source:HGNC Symbol;Acc:18799] P 8621 CDK13 cyclin-dependent kinase 13 [Source:HGNC Symbol;Acc:1733] zzz999 22824 HSPA4L heat shock 70kDa protein 4-like [Source:HGNC Symbol;Acc:17041] P T 3834 KIF25 kinesin family member 25 [Source:HGNC Symbol;Acc:6390] zzz999 10061 ABCF2 ATP-binding cassette, sub-family F (GCN20), member 2 [Source:HGNC Symbol;Acc:71] zzz999 54805 CNNM2 cyclin M2 [Source:HGNC Symbol;Acc:103] zzz999 6691 SPINK2 serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) [Source:HGNC Symbol;Acc:11245] zzz999 51103 NDUFAF1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 [Source:HGNC Symbol;Acc:18828] zzz999 8914 TIMELESS timeless homolog (Drosophila) [Source:HGNC Symbol;Acc:11813] zzz999 90121 TSR2 TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25455] zzz999 3156 HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase [Source:HGNC Symbol;Acc:5006] zzz999 64131 XYLT1 xylosyltransferase I [Source:HGNC Symbol;Acc:15516] zzz999 4359 MPZ myelin protein zero [Source:HGNC Symbol;Acc:7225] P T 23197 FAF2 Fas associated factor family member 2 [Source:HGNC Symbol;Acc:24666] P T 55288 RHOT1 ras homolog gene family, member T1 [Source:HGNC Symbol;Acc:21168] zzz999 2558 GABRA5 gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:HGNC Symbol;Acc:4079] zzz999 2892 GRIA3 glutamate receptor, ionotrophic, AMPA 3 [Source:HGNC Symbol;Acc:4573] zzz999 5699 PSMB10 proteasome (prosome, macropain) subunit, beta type, 10 [Source:HGNC Symbol;Acc:9538] zzz999 9086 EIF1AY eukaryotic translation initiation factor 1A, Y-linked [Source:HGNC Symbol;Acc:3252] T 1795 DOCK3 dedicator of cytokinesis 3 [Source:HGNC Symbol;Acc:2989] zzz999 51573 GDE1 glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:29644] zzz999 23001 WDFY3 WD repeat and FYVE domain containing 3 [Source:HGNC Symbol;Acc:20751] P T 5683 PSMA2 proteasome (prosome, macropain) subunit, alpha type, 2 [Source:HGNC Symbol;Acc:9531] zzz999 394 ARHGAP5 Rho GTPase activating protein 5 [Source:HGNC Symbol;Acc:675] P T 36 ACADSB acyl-CoA dehydrogenase, short/branched chain [Source:HGNC Symbol;Acc:91] T 178 AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [Source:HGNC Symbol;Acc:321] zzz999 9669 EIF5B eukaryotic translation initiation factor 5B [Source:HGNC Symbol;Acc:30793] zzz999 1039 CDR2 cerebellar degeneration-related protein 2, 62kDa [Source:HGNC Symbol;Acc:1799] zzz999 9131 AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1 [Source:HGNC Symbol;Acc:8768] zzz999 4173 MCM4 minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:6947] zzz999 8505 PARG poly (ADP-ribose) glycohydrolase [Source:HGNC Symbol;Acc:8605] zzz999 6526 SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 [Source:HGNC Symbol;Acc:11038] T 1998 ELF2 E74-like factor 2 (ets domain transcription factor) [Source:HGNC Symbol;Acc:3317] P T 662 BNIP1 BCL2/adenovirus E1B 19kDa interacting protein 1 [Source:HGNC Symbol;Acc:1082] zzz999 9790 BMS1 BMS1 homolog, ribosome assembly protein (yeast) [Source:HGNC Symbol;Acc:23505] zzz999 54505 DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Source:HGNC Symbol;Acc:15815] zzz999 1977 EIF4E eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:3287] zzz999 1757 SARDH sarcosine dehydrogenase [Source:HGNC Symbol;Acc:10536] zzz999 8504 PEX3 peroxisomal biogenesis factor 3 [Source:HGNC Symbol;Acc:8858] zzz999 11122 PTPRT protein tyrosine phosphatase, receptor type, T [Source:HGNC Symbol;Acc:9682] T 11321 GPN1 GPN-loop GTPase 1 [Source:HGNC Symbol;Acc:17030] T 2321 FLT1 fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) [Source:HGNC Symbol;Acc:3763] zzz999 23107 MRPS27 mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:14512] zzz999 51 ACOX1 acyl-CoA oxidase 1, palmitoyl [Source:HGNC Symbol;Acc:119] zzz999 10059 DNM1L dynamin 1-like [Source:HGNC Symbol;Acc:2973] zzz999 1964 EIF1AX eukaryotic translation initiation factor 1A, X-linked [Source:HGNC Symbol;Acc:3250] T 1762 DMWD dystrophia myotonica, WD repeat containing [Source:HGNC Symbol;Acc:2936] zzz999 51460 SFMBT1 Scm-like with four mbt domains 1 [Source:HGNC Symbol;Acc:20255] zzz999 8518 IKBKAP inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein [Source:HGNC Symbol;Acc:5959] zzz999 23312 DMXL2 Dmx-like 2 [Source:HGNC Symbol;Acc:2938] T 5704 PSMC4 proteasome (prosome, macropain) 26S subunit, ATPase, 4 [Source:HGNC Symbol;Acc:9551] zzz999 8813 DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:HGNC Symbol;Acc:3005] zzz999 5578 PRKCA protein kinase C, alpha [Source:HGNC Symbol;Acc:9393] T 10038 PARP2 poly (ADP-ribose) polymerase 2 [Source:HGNC Symbol;Acc:272] zzz999 8872 CDC123 cell division cycle 123 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16827] zzz999 4298 MLLT1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 [Source:HGNC Symbol;Acc:7134] zzz999 9885 OSBPL2 oxysterol binding protein-like 2 [Source:HGNC Symbol;Acc:15761] zzz999 53340 SPA17 sperm autoantigenic protein 17 [Source:HGNC Symbol;Acc:11210] zzz999 2788 GNG7 guanine nucleotide binding protein (G protein), gamma 7 [Source:HGNC Symbol;Acc:4410] zzz999 9331 B4GALT6 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:HGNC Symbol;Acc:929] P T 5189 PEX1 peroxisomal biogenesis factor 1 [Source:HGNC Symbol;Acc:8850] zzz999 1950 EGF epidermal growth factor [Source:HGNC Symbol;Acc:3229] zzz999 10285 SMNDC1 survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:16900] zzz999 84527 ZNF559 zinc finger protein 559 [Source:HGNC Symbol;Acc:28197] zzz999 23530 NNT nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:7863] T 9941 EXOG endo/exonuclease (5'-3'), endonuclease G-like [Source:HGNC Symbol;Acc:3347] zzz999 889 KRIT1 KRIT1, ankyrin repeat containing [Source:HGNC Symbol;Acc:1573] zzz999 9542 NRG2 neuregulin 2 [Source:HGNC Symbol;Acc:7998] zzz999 51574 LARP7 La ribonucleoprotein domain family, member 7 [Source:HGNC Symbol;Acc:24912] zzz999 9777 TM9SF4 transmembrane 9 superfamily protein member 4 [Source:HGNC Symbol;Acc:30797] zzz999 27316 RBMX RNA binding motif protein, X-linked [Source:HGNC Symbol;Acc:9910] zzz999 734 OSGIN2 oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:1355] T 4776 NFATC4 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 [Source:HGNC Symbol;Acc:7778] zzz999 2561 GABRB2 gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:HGNC Symbol;Acc:4082] T 64087 MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta) [Source:HGNC Symbol;Acc:6937] T 7020 TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) [Source:HGNC Symbol;Acc:11742] zzz999 11278 KLF12 Kruppel-like factor 12 [Source:HGNC Symbol;Acc:6346] T 1212 CLTB clathrin, light chain B [Source:HGNC Symbol;Acc:2091] zzz999 132 ADK adenosine kinase [Source:HGNC Symbol;Acc:257] zzz999 8576 STK16 serine/threonine kinase 16 [Source:HGNC Symbol;Acc:11394] zzz999 5141 PDE4A phosphodiesterase 4A, cAMP-specific [Source:HGNC Symbol;Acc:8780] zzz999 10124 ARL4A ADP-ribosylation factor-like 4A [Source:HGNC Symbol;Acc:695] T 8087 FXR1 fragile X mental retardation, autosomal homolog 1 [Source:HGNC Symbol;Acc:4023] zzz999 10240 MRPS31 mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:16632] zzz999 2947 GSTM3 glutathione S-transferase mu 3 (brain) [Source:HGNC Symbol;Acc:4635] T 7371 UCK2 uridine-cytidine kinase 2 [Source:HGNC Symbol;Acc:12562] zzz999 1213 CLTC clathrin, heavy chain (Hc) [Source:HGNC Symbol;Acc:2092] zzz999 8850 KAT2B K(lysine) acetyltransferase 2B [Source:HGNC Symbol;Acc:8638] zzz999 8573 CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) [Source:HGNC Symbol;Acc:1497] zzz999 55922 NKRF NFKB repressing factor [Source:HGNC Symbol;Acc:19374] zzz999 2585 GALK2 galactokinase 2 [Source:HGNC Symbol;Acc:4119] zzz999 55756 INTS9 integrator complex subunit 9 [Source:HGNC Symbol;Acc:25592] zzz999 8559 PRPF18 PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17351] zzz999 55699 IARS2 isoleucyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:29685] zzz999 27236 ARFIP1 ADP-ribosylation factor interacting protein 1 [Source:HGNC Symbol;Acc:21496] zzz999 1737 DLAT dihydrolipoamide S-acetyltransferase [Source:HGNC Symbol;Acc:2896] zzz999 9443 MED7 mediator complex subunit 7 [Source:HGNC Symbol;Acc:2378] zzz999 9939 RBM8A RNA binding motif protein 8A [Source:HGNC Symbol;Acc:9905] P T 90355 C5orf30 chromosome 5 open reading frame 30 [Source:HGNC Symbol;Acc:25052] T 8867 SYNJ1 synaptojanin 1 [Source:HGNC Symbol;Acc:11503] P

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